ACMI download links

Current version

• acmi-1.5.1.tar.gz - ACMI 1.5.1 source code - added ability to run BP multiple times to generate an ensemble of solutions for more accurate protein structures (paper in submission). Also added versioning to program output and more robust checkpointing in case BP crashes.
• README.txt - ACMI manual, detailing main components and version changes
  
• nmerdb-4.0.tar.gz - ACMI's 5-mer database, updated to include over 9500 chains
  
  

  Previous versions

• acmi-1.4.1.tar.gz - ACMI 1.4.1 source code - includes guiding BP function discussed in Soni et al, ACM-BCB 2010 and ability to input list of potential backbone structure from PHENIX's "find helices and strands" program, plus checkpointing and restarting of BP and shfear.
  
• INSTALL.txt - ACMI installation guide (read this first!)
• LICENSE.txt - GPL v3 license
• MANUAL.txt - ACMI 1.0 Manual detailing ACMI's main components
• acmi-1.3.1.tar.gz - ACMI 1.3.1 source code - ability to input partial solution of structure a nd use CCP4 electron-density maps
  
• acmi-1.1.tar.gz - ACMI 1.1 source code
• data.tar.gz - Density maps used for testing in Bioinformatics 2007 article
• nmerdb-1.0.tar.gz - ACMI's 5-mer database

Problems? Email soni@cs.wisc.edu