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Jignesh M. Patel 

Associate Professor
Computer Sciences
University of Wisconsin

Office: 4357 CS
Tel: (608) 263-7308
Fax: (608) 262-9777
Email: [firstname]@cs.wisc.edu

Address:
1210 W. Dayton St.
University of Wisconsin
Madison, WI 53706-1685
For directions click here.

 


Research

 

Research Interests

 

 

Database Management Systems: My current interests are: energy-efficient data processing, methods for searching and mining large graph and sequence/string data sets, and spatial data management.

 

Selected Publications
  DB Core
bullet Towards Eco-friendly Database Management Systems, W. Lang and J. M. Patel, CIDR 2009.
bullet Join Processing for Flash SSDs: Remembering Past Lessons, J. Do and J. M. Patel, DaMoN 2009.
bullet Data Morphing: An Adaptive, Cache-Conscious Storage Technique, R. A. Hankins and J. M. Patel, VLDB 2003.
bullet Effect of Node Size on the Performance of Cache-Conscious B+-trees, R. A. Hankins and J. M. Patel, SIGMETRICS 2003.
 
  Graphs and  Sequences
bullet ProbeMatch: rapid alignment of oligonucleotides to genome allowing both gaps and mismatches, Y. J. Kim, N. Teletia, V. Ruotti, C. A. Maher, A. Chinnaiyan, R. Stewart, J. A. Thomson and J. M. Patel, Bioinformatics 2009. Download Probematch
bullet Efficient Aggregation for Graph Summarization, Y. Tian, R. Hankins and J. M. Patel, SIGMOD 2008.
bullet TALE: A Tool for Approximate Large Graph Matching, Y. Tian and J. M. Patel, ICDE 2008. For the extended version, click here.
bullet SAGA: A Subgraph Matching Tool for Biological Graphs, Y. Tian, R. C. McEachin, C. Santos, D. J. States and J. M. Patel, Bioinformatics, 2007.
bullet A Framework for Protein Structure Classification and Identification of Novel Protein Structures, Y. J. Kim and J. M. Patel,  BMC Bioinformatics 2006, 7:456.
bullet Declarative Querying for Biological Sequence Databases, S. Tata, J. M. Patel, J. S. Friedman, and A. Swaroop, ICDE 2006.
bullet miBLAST: Scalable Evaluation of a Batch of Nucleotide Sequence Queries with BLAST, Y. J. Kim, A. Boyd, B. D. Athey, and J. M. Patel, Nucleic Acids Research, 2005, 33: 4335-4344.
bullet Practical Suffix Tree Construction, S. Tata, R. A. Hankins, and J. M. Patel, VLDB 2004. For the journal version, click here.
bullet OASIS: An Online and Accurate Technique for Local-alignment Searches on Biological Sequences, C. Meek, J. M. Patel, and S. Kasetty, VLDB 2003.
 
  Spatial
bullet
An Efficient and Accurate Method for Evaluating Time Series Similarity,  M. Morse and J. M. Patel, SIGMOD 2007.
bullet Efficient Evaluation of All-Nearest-Neighbors Queries, Y. Chen and J. M. Patel, ICDE 2007.
bullet Partition Based Spatial Merge Join, Jignesh M. Patel and David J. DeWitt, Proceedings of the 1996 SIGMOD Conference, Montreal, Canada, June, 1996.
 

 

 List of all publications at DBLP, and at PubMed

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Selected Teaching Activities

 
bullet CS 564: Database Management Systems (S10)
bullet CS 764: Topics in Database Management Systems (F09, F08)

 

 

Selected Professional Activities

 
bullet Core Database Technlology PC Chair, VLDB 2009.
bullet Recent Program Committees: SIGMOD 2009, VLDB 2008, VLDB 2007, SIGMOD 2007, VLDB 2006, ICDE 2006, SIGMOD 2005, VLDB 2005, ICDE 2005 (Vice-Chair).

Last updated by Jignesh M. Patel on Feb 01, 2010.