From crittend@itis.com Mon Jul 17 10:57:10 2000 Date: Fri, 14 Jul 2000 19:25:15 -0500 From: Lyman/Margaret Crittenden To: Multiple Recipients of Subject: July, 2000 Mapping References Resent-Date: 15 Jul 2000 00:43:15 -0000 Resent-From: angenmap@genome.ansci.iastate.edu Resent-cc: recipient list not shown: ; [ AnGenMap Discussion Mailing List - Mail distributed to 706 members ] [ INFO: http://www.genome.iastate.edu/community/discuss.html ] ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ JOURNAL REFS. (MAPPING METHODS AND REVIEWS) NLM 7/00 1. Ahmadian, A.; Gharizadeh, B.; Gustafsson, A. C.; Sterky, F.; Nyren, P.; Uhlen, M.Lundeberg, J. Single-nucleotide polymorphism analysis by pyrosequencing. Anal Biochem. 280:103-10, 2000. ADDRESS: Department of Biotechnology, The Royal Institute of Technology (KTH), Stockholm, Sweden. Medline UID: 20263277 2. Armstrong, B.; Stewart, M.Mazumder, A. Suspension arrays for high throughput, multiplexed single nucleotide polymorphism genotyping. Cytometry. 40:102-8, 2000. ADDRESS: Axys Pharmaceuticals, La Jolla, CA, USA. Medline UID: 20265882 3. Azofeifa, J.; Fauth, C.; Kraus, J.; Maierhofer, C.; Langer, S.; Bolzer, A.; Reichman, J.; Schuffenhauer, S.Speicher, M. R. An optimized probe set for the detection of small interchromosomal aberrations by use of 24-color FISH. Am J Hum Genet. 66:1684-8, 2000. ADDRESS: Institut fur Anthropologie und Humangenetik, Ludwig-Maximilians-Universitat Munchen, Munich, Germany. Medline UID: 20311550 4. Barton, N. H. Estimating multilocus linkage disequilibria. Heredity. 84 ( Pt 3):373-89, 2000. ADDRESS: Institute of Cell, Animal and Population Biology, University of Edinburgh, West Mains Road, Edinburgh EH9 3 JT, Scotland. n.barton@ed.ac.uk. Medline UID: 20225732 5. Bink, M. C.; Janss, L. L.Quaas, R. L. Markov chain Monte Carlo for mapping a quantitative trait locus in outbred populations. Genet Res. 75:231-41, 2000. ADDRESS: Wageningen Institute of Animal Sciences, Wageningen Agricultural University, The Netherlands. m.c.a.m.bink@cpro.dlo.nl. Medline UID: 20276978 6. Calinski, T.; Kaczmarek, Z.; Krajewski, P.; Frova, C.Sari-Gorla, M. A multivariate approach to the problem of QTL localization. Heredity. 84 ( Pt 3):303-10, 2000. ADDRESS: Department of Mathematical and Statistical Methods, Agricultural University, Wojska Polskiego 28, 60-637 Poznan, Poland. Medline UID: 20315462 7. Forrest, W. F. and Feingold, E. Composite statistics for QTL mapping with moderately discordant sibling pairs. Am J Hum Genet. 66:1642-60, 2000. ADDRESS: Department of Human Genetics, Graduate School of Public Health, University of Pittsburgh, Pittsburgh, PA 15261, USA. forrest@forrest.hgen.pitt.edu. Medline UID: 20311546 8. Frisch, M.; Bohn, M.Melchinger, A. E. PLABSIM: software for simulation of marker-assisted backcrossing. J Hered. 91:86-7, 2000. ADDRESS: Institute of Plant Breeding, Seed Science, and Population Genetics, University of Hohenheim, Stuttgart, Germany. Medline UID: 20201743 9. Gudbjartsson, D. F.; Jonasson, K.; Frigge, M. L.Kong, A. Allegro, a new computer program for multipoint linkage analysis [letter].25:12-3, 2000. Medline UID: 20264356 10. Hill, A. V. Genetics and genomics of infectious disease susceptibility. Br Med Bull. 55:401-13, 1999. Wellcome Trust Centre for Human Genetics, Nuffield Department of Clinical Medicine, University of Oxford, UK. Medline UID: 20188940 11. Ishiwata, T.; Nishigai, K.; Kawahara, K.Asano, G. [Detection of messenger RNA expression cells in tissue specimens: technical note for in situ hybridization using digoxigenin labeled probe]. J Nippon Med Sch. 67:38-41, 2000. ADDRESS: Department of Pathology, Nippon Medical School, Japan. Medline UID: 20242121 12. Jouquand, S.; Andre, C.; Cheron, A.; Hitte, C.; Chuat, J. C.Galibert, F. Using the fluorogenic 5' nuclease assay for high-throughput detection of (CA)n repeats in radiation hybrid mapping. Biotechniques. 28:754-8, 760-2, 764-5, 2000. ADDRESS: UPR 41 CNRS Recombinaisons genetiques, Faculte de Medecine, Rennes, France. Medline UID: 20232588 13. Liang, K. Y.; Huang, C. Y.Beaty, T. H. A unified sampling approach for multipoint analysis of qualitative and quantitative traits in sib pairs. Am J Hum Genet. 66:1631-41, 2000. ADDRESS: Department of Biostatistics, Johns Hopkins University, Baltimore, MD 21205, USA. kyliang@jhsph.edu. Medline UID: 20311545 14. Mandal, D. M.; Wilson, A. F.; Elston, R. C.; Weissbecker, K.; Keats, B. J.Bailey-Wilson, J. E. Effects of misspecification of allele frequencies on the type I error rate of model-free linkage analysis. Hum Hered. 50:126-32, 2000. ADDRESS: Department of Medicine, Section of Genetics and Geriatrics, Louisiana State University Medical Center, New Orleans, LA, USA. Medline UID: 20261508 15. Rebai, A. and Goffinet, B. More about quantitative trait locus mapping with diallel designs. Genet Res. 75:243-7, 2000. ADDRESS: INRA Centre de Toulouse, Unit of Biometry and Artificial Intelligence, Castanet-Tolosan, France. Medline UID: 20276979 16. Reineke, A. and Karlovsky, P. Simplified AFLP protocol: replacement of primer labeling by the incorporation of alpha-labeled nucleotides during PCR. Biotechniques. 28:622-3, 2000. ADDRESS: University of Hohenheim, Stuttgart, Germany. areineke@waite.adelaide.edu.au. Medline UID: 20232569 17. Schriml, L. M.; Peterson, R. J.; Gerrard, B.Dean, M. Use of denaturing HPLC to map human and murine genes and to validate single-nucleotide polymorphisms. Biotechniques. 28:740-5, 2000. ADDRESS: National Cancer Institute-Frederick Cancer Research and Development Center, MD, USA. Medline UID: 20232586 18. See, D.; Kanazin, V.; Talbert, H.Blake, T. Electrophoretic detection of single-nucleotide polymorphisms. Biotechniques. 28:710-4, 716, 2000. ADDRESS: Montana State University, Bozeman, USA. Medline UID: 20232582 19. Sham, P. C.; Cherny, S. S.; Purcell, S.Hewitt, J. K. Power of linkage versus association analysis of quantitative traits, by use of variance-components models, for sibship data. Am J Hum Genet. 66:1616-30, 2000. ADDRESS: Social, Genetic and Developmental Psychiatry Research Centre, Institute of Psychiatry, London SE5 8AF, United Kingdom. spjupcs@iop.kcl.ac.uk. Medline UID: 20311544 20. Sham, P. C.; Lin, M. W.; Zhao, J. H.Curtis, D. Power comparison of parametric and nonparametric linkage tests in small pedigrees. Am J Hum Genet. 66:1661-8, 2000. ADDRESS: Departments of Psychiatry and Biostatistics and Computing, Institute of Psychiatry, London SE5 8AF, United Kingdom. p.sham@iop.kcl.ac.uk. Medline UID: 20311547 21. Svishcheva, G. R. and Aksenovich, T. I. [Radiation hybrid mapping: statistical criteria and their properties]. Genetika. 36:283-90, 2000. ADDRESS: Institute of Cytology and Genetics, Russian Academy of Sciences, Novosibirsk, Russia. Medline UID: 20215503 22. Wilson, A. F. and Sorant, A. J. Equivalence of single- and multilocus markers: power to detect linkage with composite markers derived from biallelic loci. Am J Hum Genet. 66:1610-5, 2000. ADDRESS: Inherited Disease Research Branch, National Human Genome Research Institute, National Institutes of Health, Baltimore, MD 21224, USA. afw@nhgri.nih.gov. Medline UID: 20311543 23. Yoshida, K.; Kobayashi, M.; Futagami, K.Fujikoshi, Y. Statistical analysis of DNA sequencing data (1): accuracy test of DNA data by partial re-sequencing. Nucleic Acids Symp Ser. 65-6, 1999. ADDRESS: Department of Biological Science, Hiroshima University, Higashi-Hiroshima, Japan. Medline UID: 20241293 24. Zhao, J. H.; Curtis, D.Sham, P. C. Model-free analysis and permutation tests for allelic associations. Hum Hered. 50:133-9, 2000. ADDRESS: Department of Psychological Medicine, Institute of Psychiatry, St. Bartholomew's and Royal London School of Medicine and Dentistry, London, UK. j.zhao@iop.kcl.ac.uk. Medline UID: 20261509 **************************************************************************** ****************** Lyman/Margaret Crittenden Phone: 608-798-0791 8550 Highway 19 e-mail: crittend@itis.com Cross Plains, WI 53528-9300 USA **************************************************************************** ****************** ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ -o U.S. PIG GENOME COORDINATION PROJECT - sponsored by USDA/CSREES -o WEB: http://www.genome.iastate.edu/pig