Step 6: Plotting


In the object tree on the left in the Output node, you can find the entry called Plots. Selecting this will bring you to the plot definition overview which will probably be empty.

(Click here to go to the plot definition overview.)

figure: Plot definition overview

If you click on the "Add default plot" button at the bottom, a default plot that contains the concentrations of all metabolites against the time will be created. To edit this plot definition, double click on the entry.

figure: Plot definition dialog

In this dialog you can add more curves, delete curves or change the way individual curves are plotted. Once you are finished with the plot definition, you go back to the Time Course dialog and push the "Run" button again. Now you a new plot window like the one below, with the concentrations of all metabolites on the y axis plotted against the time on the x axis, should pop up.

figure: Plot definition dialog