| Clear() | gnBaseSpec | [inline, virtual] |
| Clone() const=0 | gnBaseSpec | [pure virtual] |
| CloneRange(const uint32 startI, const uint32 len) const=0 | gnBaseSpec | [pure virtual] |
| CropEnd(gnSeqI cropLen)=0 | gnBaseSpec | [pure virtual] |
| CropStart(gnSeqI cropLen)=0 | gnBaseSpec | [pure virtual] |
| GetLength() const=0 | gnBaseSpec | [pure virtual] |
| GetName() const | gnBaseSpec | [inline, virtual] |
| gnBaseSpec() | gnBaseSpec | [inline] |
| gnClone() | gnClone | [inline] |
| IsCircular() const | gnBaseSpec | [inline, virtual] |
| IsReverseComplement() const | gnBaseSpec | [inline, virtual] |
| m_circular | gnBaseSpec | [protected] |
| m_name | gnBaseSpec | [protected] |
| m_reverseComplement | gnBaseSpec | [protected] |
| m_sourceName | gnBaseSpec | [protected] |
| SeqRead(const gnSeqI start, gnSeqC *buf, uint32 &bufLen, const uint32 contigI) const=0 | gnBaseSpec | [pure virtual] |
| SetCircular(const boolean value) | gnBaseSpec | [inline, virtual] |
| SetName(const string &name) | gnBaseSpec | [inline, virtual] |
| SetReverseComplement(const boolean value)=0 | gnBaseSpec | [pure virtual] |
| ~gnBaseSpec() | gnBaseSpec | [inline, virtual] |
| ~gnClone() | gnClone | [inline, virtual] |
