| AddArrayEntry(gnSeqC *array[GNSEQC_MAX], const gnSeqC ch, const gnSeqC ch2) | gnCompare | [private] |
| Clone() const | gnCompare | [inline, virtual] |
| Contains(gnSeqC ch, gnSeqC ch2, boolean case_sensitive=false) const | gnCompare | |
| Contains(const gnSeqC *seq, const gnSeqC *seq2, const uint32 len, boolean case_sensitive=false) const | gnCompare | |
| Contains(const string &seq, const string &seq2, boolean case_sensitive=false) const | gnCompare | |
| CreateDNAComparator() | gnCompare | [private] |
| CreateProteinComparator() | gnCompare | [private] |
| CreateRNAComparator() | gnCompare | [private] |
| DelArrayEntry(gnSeqC *array[GNSEQC_MAX], const gnSeqC ch, const gnSeqC ch2) | gnCompare | [private] |
| DNASeqCompare() | gnCompare | [static] |
| DNASeqCompareType enum value | gnCompare | |
| GetName() const | gnCompare | [inline] |
| gnClone() | gnClone | [inline] |
| gnCompare() | gnCompare | |
| gnCompare(const gnCompareType c_type) | gnCompare | |
| gnCompare(const gnCompare &sf) | gnCompare | |
| gnCompareType enum name | gnCompare | |
| LessThan(gnSeqC ch, gnSeqC ch2, boolean case_sensitive=false) const | gnCompare | [inline] |
| LessThan(const gnSeqC *seq, const gnSeqC *seq2, const uint32 len, boolean case_sensitive=false) const | gnCompare | [inline] |
| LessThan(const string &seq, const string &seq2, boolean case_sensitive=false) const | gnCompare | [inline] |
| m_containArray | gnCompare | [private] |
| m_ignoreCase | gnCompare | [private] |
| m_name | gnCompare | [private] |
| m_pairArray | gnCompare | [private] |
| ProteinSeqCompare() | gnCompare | [static] |
| ProteinSeqCompareType enum value | gnCompare | |
| RemoveContained(const gnSeqC ch, const gnSeqC ch2) | gnCompare | [inline] |
| RemovePair(const gnSeqC ch, const gnSeqC ch2) | gnCompare | [inline] |
| RemoveSingle(const gnSeqC ch) | gnCompare | [inline] |
| RNASeqCompare() | gnCompare | [static] |
| RNASeqCompareType enum value | gnCompare | |
| SetContained(const gnSeqC ch, const gnSeqC ch2) | gnCompare | [inline] |
| SetName(string name) | gnCompare | [inline] |
| SetPair(const gnSeqC ch, const gnSeqC ch2) | gnCompare | [inline] |
| SetSingle(const gnSeqC ch) | gnCompare | [inline] |
| ~gnClone() | gnClone | [inline, virtual] |
| ~gnCompare() | gnCompare | |
