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gnDataBaseSource Member List

This is the complete list of members for gnDataBaseSource, including all inherited members.

Clone() const=0	gnDataBaseSource	[pure virtual]
Clone() const=0	gnDataBaseSource	[pure virtual]
Close()=0	gnDataBaseSource	[pure virtual]
GetContigID(const string &name) const=0	gnDataBaseSource	[pure virtual]
GetContigListLength() const=0	gnDataBaseSource	[pure virtual]
GetContigName(const uint32 i) const=0	gnDataBaseSource	[pure virtual]
GetContigSeqLength(const uint32 i) const=0	gnDataBaseSource	[pure virtual]
GetFilter() const=0	gnDataBaseSource	[pure virtual]
GetOpenString() const=0	gnDataBaseSource	[pure virtual]
GetSpec() const=0	gnDataBaseSource	[pure virtual]
gnBaseSource()	gnBaseSource	[inline]
gnClone()	gnClone	[inline]
gnDataBaseSource()	gnDataBaseSource	[inline, private]
HasContig(const string &name) const=0	gnDataBaseSource	[pure virtual]
Open(string openString)=0	gnDataBaseSource	[pure virtual]
Open()=0	gnDataBaseSource	[pure virtual]
Read(const uint64 pos, char *buf, uint32 &bufLen)=0	gnDataBaseSource	[pure virtual]
SeqRead(const gnSeqI start, char *buf, uint32 &bufLen, const uint32 contigI=ALL_CONTIGS)=0	gnDataBaseSource	[pure virtual]
SetFilter(gnFilter *filter)=0	gnDataBaseSource	[pure virtual]
~gnBaseSource()	gnBaseSource	[inline, virtual]
~gnClone()	gnClone	[inline, virtual]
~gnDataBaseSourcee()	gnDataBaseSource	[inline, virtual]

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