2004 headquarters grenoble france products software and database website http www.genostar.com genostar is a bioinformatics solution provider based in grenoble france . the company was founded in 2004 following the genostar consortium 1 that was created in 1999 as a public private consortium by genome express hybrigenics inria institut national de recherche en informatique et automatique french national institute for research in computer science and control 2 and the pasteur institute . contents 1 software 1.1 sequence assembly 1.2 genomic annotation 1.3 proteic annotation 1.4 expression data solution eds 2 database 3 industrial partners 4 academic partners 5 notes and references 6 external links software edit metabolic pathway builder is a bioinformatics environment dedicated to microbial research . this streamlined bioinformatics solution covers sequence assembly mapping annotation transfer and identification of protein domains comparative genomics structural searches metabolic pathway analysis modeling and simulation of biological networks . genostar s software is platform independent and can thus be used for both mac os x windows and linux . sequence assembly edit mapping of an ensemble of sequences on a reference sequence between a reference sequence and contigs between two sequences or between two sets of sequences finding of exact matches with minimum length using mummer detection of specific regions and snps creation of an assembled sequence relative to reference sequences genomic annotation edit gene prediction ab initio gene prediction using a hidden markov model based method blastx automatic annotation transfer using blastp proteic annotation edit metabolic pathway builder integrates several methods dedicated to proteic annotation pfam domain prediction using hmmer several emboss methods antigenic 2d structure prediction expression data solution eds edit genostar s expression data solution eds connects microarray data to genes gene products and biochemical reactions based on keywords and annotations . this software solution allows to assign expression values to the gene names and ids identify co expressed genes and visually analyze the reactions and metabolic pathways in which they are involved identify and perform analysis on co regulated genes in terms of genomic localization functional annotation and metabolism colorize cdss of interest in genomic maps according to their expression values and highlight the corresponding reactions in interactive metabolic kegg maps analyze the significance of functional data of a collection or sub collection of cdss go kegg and more fisher test collect and visualize all functional data in exportable tables and maps database edit genostar s microb database is constructed of perfectly integrated and rigorously cross checked genomic proteic biochemical and metabolic data approximately 1100 bacterial and archaeal organisms . industrial partners edit chemaxon 3 pathway solutions 4 korilog 5 academic partners edit inria institut national de recherche en informatique et automatique french national institute for research in computer science and control swiss institute of bioinformatics notes and references edit http www.ercim.eu publication ercim news enw51 rechenmann.html http www.inria.fr valorisation societes index.fr.html http www.chemaxon.com about our partners integrators http www.pathway.jp mosaic index.html mosaic http www.korilog.com index.php new powerful pathway exploration tool.html external links edit official website genostar expands deal with biopharma merial to help hunt pathogenic virulence factors genostar at bio 2010 retrieved from https en.wikipedia.org w index.php title genostar & oldid 639543162 categories software companies of francesoftware companies established in 2004biotechnology companies of francebioinformatics companiesprivately held companies of francescience and technology in grenoble navigation menu personal tools not logged intalkcontributionscreate accountlog in namespaces article talk variants views read edit view history more search navigation main pagecontentsfeatured contentcurrent eventsrandom articledonate to wikipediawikipedia store interaction helpabout wikipediacommunity portalrecent changescontact page tools what links hererelated changesupload filespecial pagespermanent linkpage informationwikidata itemcite this page print export create a bookdownload as pdfprintable version languages add links this page was last modified on 25 december 2014 at 02 32 . text is available under the creative commons attribution sharealike license ; additional terms may apply . by using this site you agree to the terms of use and privacy policy . wikipedia is a registered trademark of the wikimedia foundation inc. a non profit organization . privacy policy about wikipedia disclaimers contact wikipedia developers cookie statement mobile view