nathanae@nebula-7:/scratch/nathanae/axolotl $ export assembly=/scratch/nathanae/axolotl/s_1_oases.fa $ export oracleset=/tier2/deweylab/data/tanaka_lab/Am_asm_ETs4_RVs.fasta $ dl-fasta-len < $assembly | python -c "import numpy as np, sys; print np.mean([float(l) for l in sys.stdin.readlines()])" 221.691889192 $ dl-fasta-len < $oracleset | python -c "import numpy as np, sys; print np.mean([float(l) for l in sys.stdin.readlines()])" 623.459056397 $ cat $oracleset | grep '^>' | wc -l 113925 $ cat $assembly | grep '^>' | wc -l 74074