%% BioMed_Central_Bib_Style_v1.01

\begin{thebibliography}{10}
\providecommand{\url}[1]{[#1]}
\providecommand{\urlprefix}{}

\bibitem{shi:wahba:wright:2008}
Shi W, Wahba G, Wright SJ, Lee KE, Klein R, Klein B:
  \textbf{LASSO-Patternsearch Algorithm with Applications to Ophthalmology and
  Genomic Data}. \emph{Statistics and Its Interface} 2008, \textbf{1}:137--153.

\bibitem{LPSurl}
\textbf{{LASSO-Patternsearch} code}. [{\tt
  http://pages.cs.wisc.edu/\~{}swright/LPS/}].

\bibitem{Wri10a}
Wright SJ: \textbf{Accelerated block-coordinate relaxation for regularized
  optimization}. Technical report, University of Wisconsin-Madison 2010.

\bibitem{valdar:solberg:2006}
Valdar W, Solberg L, Gauguier D, Burnett S, Klenerman P, Cookson W, Taylor M,
  Rawlins J, Mott R, Flint J: \textbf{Genome-wide genetic association of
  complex traits in heterogeneous stock mice}. \emph{Nature Genetics} 2006,
  \textbf{38}:879--887.

\bibitem{shi:wahba:lee:2007}
Shi W, Wahba G, Lee KE: \textbf{Detecting disease causing genes by
  {LASSO}-Patternsearch Algorithm}. \emph{Proceedings of BMC Genetics} 2007.

\bibitem{ruczinski:kooperberg:leblanc:2003}
Ruczinski I, Kooperberg C, Leblanc M: \textbf{Logic Regression}. \emph{Journal
  of Computational and Graphical Statistics} 2003, \textbf{12}:475--511.

\bibitem{park:hastie:2008}
Park M, Hastie T: \textbf{Penalized logistic regression for detecting gene
  interactions}. \emph{Biostatistics} 2008, \textbf{9(1)}(30-50).

\bibitem{breiman:2001}
Breiman L: \textbf{Random forests}. \emph{Maching Learning} 2001,
  \textbf{45}:5--32.

\bibitem{zilliox:irizarry:2007}
Zilliox MJ, Irizarry RA: \textbf{A gene expression bar code for microarray
  data}. \emph{Nature Methods} 2007, \textbf{4}:911--913.

\bibitem{irizarry:hobbs:2003}
Irizarry RA, Hobbs B: \textbf{Exploration, normalization, and summaries of high
  density oligonucleotide array probe level data}. \emph{Biostatistics} 2003,
  \textbf{4}:249--64.

\bibitem{Perez-Nadales:2004}
Perez-Nadales E, Lloyd AC: \textbf{{Essential function for ErbB3 in breast
  cancer proliferation}}. \emph{Breast Cancer Research} 2004,
  \textbf{6}(3):137--139.

\bibitem{koumakpayi2006expression}
Koumakpayi IH, Diallo JS, Le~Page C, Lessard L, Gleave M, B{\'e}gin LR,
  Mes-Masson AM, Saad F: \textbf{{Expression and nuclear localization of ErbB3
  in prostate cancer}}. \emph{Clinical Cancer Research} 2006,
  \textbf{12}(9):2730.

\bibitem{Mansilla:2009}
Mansilla F, da~Costa KA, Wang S, Kruh{\o}ffer M, Lewin TM, {\O}rntoft TF,
  Coleman RA, Birkenkamp-Demtr{\"o}der K: \textbf{{Lysophosphatidylcholine
  acyltransferase 1 (LPCAT1) overexpression in human colorectal cancer}}.
  \emph{Journal of Molecular Medicine} 2009, \textbf{87}:85--97.

\bibitem{miller1989lack}
Miller YE, Minna JD, Gazdar AF: \textbf{{Lack of expression of aminoacylase-1
  in small cell lung cancer. Evidence for inactivation of genes encoded by
  chromosome 3p.}} \emph{Journal of Clinical Investigation} 1989,
  \textbf{83}(6):2120.

\bibitem{kayed2006fxyd3}
Kayed H, Kleeff J, Kolb A, Ketterer K, Keleg S, Felix K, Giese T, Penzel R,
  Zentgraf H, B{\"u}chler MW, et~al.: \textbf{{FXYD3 is overexpressed in
  pancreatic ductal adenocarcinoma and influences pancreatic cancer cell
  growth}}. \emph{International Journal of Cancer} 2006, \textbf{118}:43--54.

\bibitem{dang2007role}
Dang T, et~al.: \textbf{{The role of Notch3 signaling pathway in pancreatic
  cancer}}. In \emph{ASCO Meeting Abstracts}, \emph{Volume 25(18S)} 2007:21049.

\bibitem{kristiansen2002cd24}
Kristiansen G, Denkert C, Schluns K, Dahl E, Pilarsky C, Hauptmann S:
  \textbf{{CD24 is expressed in ovarian cancer and is a new independent
  prognostic marker of patient survival}}. \emph{American Journal of Pathology}
  2002, \textbf{161}(4):1215.

\bibitem{kristiansen2003cd24:2}
Kristiansen G, Schl{\"u}ns K, Yongwei Y, Denkert C, Dietel M, Petersen I:
  \textbf{{CD24 is an independent prognostic marker of survival in nonsmall
  cell lung cancer patients}}. \emph{British Journal of Cancer} 2003,
  \textbf{88}(2):231--236.

\bibitem{kristiansen2003cd24}
Kristiansen G, Winzer KJ, Mayordomo E, Bellach J, Schl{\"u}ns K, Denkert C,
  Dahl E, Pilarsky C, Altevogt P, Guski H, et~al.: \textbf{{CD24 expression is
  a new prognostic marker in breast cancer}}. \emph{Clinical Cancer Research}
  2003, \textbf{9}(13):4906.

\bibitem{weichert2005cytoplasmic}
Weichert W, Denkert C, Burkhardt M, Gansukh T, Bellach J, Altevogt P, Dietel M,
  Kristiansen G: \textbf{{Cytoplasmic CD24 expression in colorectal cancer
  independently correlates with shortened patient survival}}. \emph{Clinical
  Cancer Research} 2005, \textbf{11}(18):6574.

\bibitem{kidokoro:2008}
Kidokoro T, Tanikawa C, Furukawa Y, Katagiri T, Nakamura Y, Matsuda K:
  \textbf{CDC20, a potential cancer therapeutic target, is negatively regulated
  by p53}. \emph{Oncogene} 2008, \textbf{27}:1562--1571.

\bibitem{chhabra:2007}
Chhabra A, Fernando H, Watkins G, Mansel RE, Jiang WG: \textbf{Expression of
  transcription factor CREB1 in human breast cancer and its correlation with
  prognosis}. \emph{Oncology Reports} 2007, \textbf{18(4)}:953--958.

\bibitem{sultan:2005}
Sultan AS, Xie J, LeBaron MJ, Ealley EL, Nevalainen MT, Rui H: \textbf{Stat5
  promotes homotypic adhesion and inhibits invasive characteristics of human
  breast cancer cells}. \emph{Oncogene} 2005, \textbf{24(5)}:746--60.

\bibitem{ikeda:2010}
Ikeda H, Taira N, Hara F, Fujita T, Yamamoto H, Soh J, Toyooka S, Nogami T,
  Shien T, Doihara H, Miyoshi S: \textbf{The estrogen receptor influences
  microtubule-associated protein tau (MAPT) expression and the selective
  estrogen receptor inhibitor fulvestrant downregulates MAPT and increases the
  sensitivity to taxane in breast cancer cells}. \emph{Breast Cancer Research}
  2010, \textbf{12}:R43.

\end{thebibliography}

\newcommand{\BMCxmlcomment}[1]{}

\BMCxmlcomment{

<refgrp>

<bibl id="B1">
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    <au><snm>Wahba</snm><fnm>G.</fnm></au>
    <au><snm>Wright</snm><fnm>S. J.</fnm></au>
    <au><snm>Lee</snm><fnm>K. E.</fnm></au>
    <au><snm>Klein</snm><fnm>R.</fnm></au>
    <au><snm>Klein</snm><fnm>B.</fnm></au>
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  <source>Statistics and Its Interface</source>
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  <fpage>137</fpage>
  <lpage>153</lpage>
</bibl>

<bibl id="B2">
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  <volume>12</volume>
  <fpage>R43</fpage>
</bibl>

</refgrp>
} % end of \BMCxmlcomment
