Flexible Pattern Matching in Strings: Practical On-Line Search Algorithms for Texts and Biological Sequences

Overview

Recent years have witnessed a dramatic increase of interest in sophisticated string matching problems, especially in information retrieval and computational biology. This book presents a practical approach to string matching problems, focusing on the algorithms and implementations that perform best in practice. It covers searching for simple, multiple and extended strings, as well as regular expressions, and exact and approximate searching. It includes all the most significant new developments in complex pattern ...

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Overview

Recent years have witnessed a dramatic increase of interest in sophisticated string matching problems, especially in information retrieval and computational biology. This book presents a practical approach to string matching problems, focusing on the algorithms and implementations that perform best in practice. It covers searching for simple, multiple and extended strings, as well as regular expressions, and exact and approximate searching. It includes all the most significant new developments in complex pattern searching. The clear explanations, step-by-step examples, algorithm pseudocode, and implementation efficiency maps will enable researchers, professionals and students in bioinformatics, computer science, and software engineering to choose the most appropriate algorithms for their applications.

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Editorial Reviews

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"This book is on the domain of searching.... [It] is actually unique on the subject." Mathematical Reviews
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Product Details

  • ISBN-13: 9780521039932
  • Publisher: Cambridge University Press
  • Publication date: 8/18/2007
  • Pages: 232
  • Product dimensions: 6.85 (w) x 9.72 (h) x 0.47 (d)

Table of Contents

1. Introduction; 2. String matching; 3. Multiple string matching; 4. Extended string matching; 5. Regular expression matching; 6. Approximate matching; 7. Conclusion; Bibliography; Index.

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    Posted Fri Oct 02 00:00:00 EDT 2009

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