Statistical Genomics Books

• Altman R (2012) Translational Bioinformatics. .
• Bailey NTJ (1961) Introduction to the Mathematical Theory of Genetic Linkage. Clarendon Press, Oxford.
• Bateson W (1909, 1913) Mendel's Principles of Heredity. Cambridge U Press.
• Bernardo R (2001) Breeding for Quantitative Traits in Plants. Stemma Press. ISBN 0-9720724-0-3
• Broman KW, Sen S (2009) A guide to QTL mapping with R/qtl. Spinger.
• Bulmer MG (1985) The Mathematical Theory of Quantitative Genetics. Clarendon Press, Oxford.
• Falconer DS, Mackay TFC (1996) Introduction to Quantitative Genetics. Ed 4. Longman, New York.
• FAO (2007) Marker-assisted selection: Current status and future perspectives in crops, livestock, forestry and fish. [Book]
• Kole C, Abbott AG (2008) Principles and practices of plant genomics, vol 1, Genome Mapping. Science Publishers, Enfield, NH.
• Lange K (1997) Mathematical and Statistical Methods for Genetic Analysis, Springer.
• Liu B (1998) Statistical Genomics. CRC Press.
• Lynch M and Walsh B (1997) Fundamentals of Quantitative Genetics. Sinauer Associates. ISBN 0-87893-481-2. (see additional notes with updated material for Part II. Quantitative Trait Loci)
• Mather K, Jinks JL (1982) Biometrical Genetics. 3rd Edn. Chapman and Hall.
• Nyquist L (1972-1988) Statistical Genetics with a focus on Animal and Plant Breeding (course notes available online), Agronomy Dept, Purdue U.
• Oraguzie NC, Rikkerink EHA, Gardiner SE, de Silva HN (2007) Association mapping in plants. Springer, NY.
• Ott J (1991) Analysis of human genetic linkage (rev). John Hopkins U Press.
• Sorensen D, Gianola D (2002) Likelihood, Bayesian, and MCMC Methods in Quantitative Genetics. Springer, NY.
• Thompson EA (2000) Statistical Inferences from Genetic Data on Pedigrees. IMS.
• Walsh JB (2006) Evolutionary Quantitative Genetics, workshop in Denmark. (molecular markers to detect selection, quantitative genetics of microarrays, the geometric constraints in multivariate trait response) [Workshop Notes]
• Weir BS (1997) Genetic Data Analysis, 2nd. ed. Sinauer Associates.
• Zeng ZB (2000) Unpublished Course Notes on QTLs.
• Weller J (2009) Quantitative Trait Loci Analysis in Animals, 2nd ed.
• Wu R, Ma CX, Casella G (2007) Statistical Genetics of Quantitative Traits: Linkage, Maps and QTL. Springer.

• A Cell Biologist's Guide to Modeling and Bioinformatics, J Wiley Publ, 2008.

• Simon RM et.al. (2003) Design and Analysis of DNA Microarray Investigations. Springer isbn 0-387-00135-2
• Gohlmann H. and, Talloem W (2009) Gene Expression Studies Using Afymetrix Microarrays. CRC Press Chapman/Hall isbn 978-1-4200-6515-2
• Speed T (2003) Statistical Analysis of Gene Expression Microarray Data. Chapman & Hall/CRC 1-58488-327-8.
• Hahne F et al.(2008) Bioconductor Case Studies. Springer (see www.bioconductor.org)
• Gentleman R etal. (200x) Bioinformatics and Computation Biology Solutions using R and Bioconductor. Springer (see www.bioconductor.org)
• McConnell P, Simon M, Lin A, Cuticchia J (200x) Methods Of Microarray Data Analysis VI. ISBN-10: 1441483675 ISBN-13: 978-1441483676,
• Amaratunga, Cabrera (2004) Exploration and Analysis of DNA Microarray and Protein Array Data. Wiley.

• Other Books on Statistical/Quantitative Genetics/Genomics
• Comparison of Book Tables of Contents
• Statistical Genomics References