From crittend@itis.com Thu Aug 15 15:14:05 2002 Date: Tue, 13 Aug 2002 15:27:08 -0700 From: Lyman/Margaret Crittenden To: Multiple Recipients of Subject: Mapping References, August, 2002 Resent-Date: 13 Aug 2002 20:32:48 -0000 Resent-From: angenmap@genome.ansci.iastate.edu Resent-cc: recipient list not shown: ; [ AnGenMap Discussion Mailing List - Mail distributed to 875 members ] [ INFO: http://www.genome.iastate.edu/community/discuss.html ] ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ JOURNAL REFS. (MAPPING METHODS AND REVIEWS) NLM 8/02 1. Adam, D. Draft cow genome heads the field. Nature. 417:778, 2002. Medline UID: 22070364 2. Brion, M.; Cao, R.; Salas, A.; Lareu, M. V.Carracedo, A. New method to measure minisatellite variant repeat variation in population genetic studies. Am J Human Biol. 14:421-8, 2002. ADDRESS: Institute of Legal Medicine, University of Santiago de Compostela, E-15705 Santiago de Compostela, Galicia, Spain. Medline UID: 22104872 3. Carlborg, O. and Andersson, L. Use of randomization testing to detect multiple epistatic QTLs. Genet Res. 79:175-84, 2002. ADDRESS: Department of Animal Breeding and Genetics, Swedish University of Agricultural Sciences, BMC, Box 597, S-751 24 Uppsala, Sweden. orjan.carlborg@hgen.slu.se. Medline UID: 22069405 4. Deng, H. W.; Chen, W. M.Recker, R. R. Transmission disequilibrium test with discordant sib pairs when parents are available. Hum Genet. 110:451-61, 2002. ADDRESS: Department of Biomedical Sciences, Creighton University, 601 N. 30th St., Suite 6787, Omaha, NE 68131, USA. deng@creighton.edu. Medline UID: 22067700 5. Deng, H. W. and Li, J. The effects of selected sampling on the transmission disequilibrium test of a quantitative trait locus. Genet Res. 79:161-74, 2002. ADDRESS: Laboratory of Molecular and Statistical Genetics, College of Life Sciences, Hunan Normal University, ChangSha, Hunan 410081, P. R. China. deng@creighton.edu. Medline UID: 22069404 6. Etzel, C. J. and Guerra, R. Meta-analysis of genetic-linkage analysis of quantitative-trait loci. Am J Hum Genet. 71:56-65, 2002. ADDRESS: Department of Epidemiology, The University of Texas M. D. Anderson Cancer Center, Houston 77030, USA. cetzel@mdanderson.org. Medline UID: 22062557 7. Gao, Y. M. and Wan, P. [Studies of marker screening efficiency and corresponding influencing factors in QTL composite interval mapping]. Yi Chuan Xue Bao. 29:555-61, 2002. ADDRESS: Agronomy Department, Anhui Agricultural University, Hefei 230036, China. Medline UID: 22091592 8. Gruber, J. D.; Colligan, P. B.Wolford, J. K. Estimation of single nucleotide polymorphism allele frequency in DNA pools by using Pyrosequencing. Hum Genet. 110:395-401, 2002. ADDRESS: Clinical Diabetes and Nutrition Section, Phoenix Epidemiology and Clinical Research Branch, National Institute of Diabetes and Digestive and Kidney Diseases/NIH, 4212 North 16th Street, Phoenix, AZ 85016, USA. Medline UID: 22067692 9. Hoti, F. J.; Sillanpaa, M. J.Holmstrom, L. A note on estimating the posterior density of a quantitative trait locus from a Markov chain Monte Carlo sample. Genet Epidemiol. 22:369-76, 2002. ADDRESS: Rolf Nevanlinna Institute, University of Helsinki, Helsinki, Finland. Medline UID: 22021297 10. Hsu, F. C.; Liang, K. Y.; Beaty, T. H.Barnes, K. C. Unified sampling approach for multipoint linkage disequilibrium mapping of qualitative and quantitative traits. Genet Epidemiol. 22:298-312, 2002. ADDRESS: Department of Biostatistics, Johns Hopkins Bloomberg School of Public Health, Baltimore, Maryland, USA. Medline UID: 22021292 11. Ky, B. and Shughrue, P. J. Methods to enhance signal using isotopic in situ hybridization. J Histochem Cytochem. 50:1031-7, 2002. ADDRESS: Merck Research Laboratories, Merck and Co., West Point, Pennsylvania 19486, USA. Medline UID: 22129003 12. Lindroos, K.; Sigurdsson, S.; Johansson, K.; Ronnblom, L.Syvanen, A. C. Multiplex SNP genotyping in pooled DNA samples by a four-colour microarray system. Nucleic Acids Res. 30:e70, 2002. ADDRESS: Department of Medical Sciences, Uppsala University, 75185 Uppsala, Sweden. Medline UID: 22131786 13. Norton, N.; Williams, N. M.; Williams, H. J.; Spurlock, G.; Kirov, G.; Morris, D. W.; Hoogendoorn, B.; Owen, M. J.O'Donovan, M. C. Universal, robust, highly quantitative SNP allele frequency measurement in DNA pools. Hum Genet. 110:471-8, 2002. ADDRESS: Department of Psychological Medicine, University of Wales College of Medicine, Heath Park, Cardiff CF14 4XN, UK. Medline UID: 22067702 14. Pan, X. and Weissman, S. M. An approach for global scanning of single nucleotide variations. Proc Natl Acad Sci U S A. 99:9346-51, 2002. ADDRESS: Molecular Staging, Inc., 300 George Street, Suite 701, New Haven, CT 06511, USA. Medline UID: 22103686 15. Putter, H.; Sandkuijl, L. A.van Houwelingen, J. C. Score test for detecting linkage to quantitative traits. Genet Epidemiol. 22:345-55, 2002. ADDRESS: Department of Medical Statistics, Leiden University Medical Center, Leiden, The Netherlands. h.putter@lumc.nl. Medline UID: 22021295 16. Rannala, B. Finding genes influencing susceptibility to complex diseases in the post-genome era. Am J Pharmacogenomics. 1:203-21, 2001. ADDRESS: Department of Medical Genetics, University of Alberta, Edmonton, Alberta, Canada. brannala@ualberta.ca. Medline UID: 22078881 17. Seaman, S. R.; Richardson, S.; Stucker, I.Benhamou, S. A Bayesian partition model for case-control studies on highly polymorphic candidate genes. Genet Epidemiol. 22:356-68, 2002. ADDRESS: MRC Biostatistics Unit, Institute of Public Health, Cambridge, England. shaun.seaman@mrc-bsu.cam.ac.uk. Medline UID: 22021296 18. Sillanpaa, M. J. and Corander, J. Model choice in gene mapping: what and why. Trends Genet. 18:301-7, 2002. ADDRESS: Rolf Nevanlinna Institute, FIN-00014 University of Helsinki, Finland. mjs@rolf.helsinki.fi. Medline UID: 22041418 19. Tang, H. K. and Siegmund, D. Mapping multiple genes for quantitative or complex traits. Genet Epidemiol. 22:313-27, 2002. ADDRESS: Hewlett Packard, Palo Alto, California, USA. Medline UID: 22021293 20. Tolle, R. Information technology tools for efficient SNP studies. Am J Pharmacogenomics. 1:303-14, 2001. ADDRESS: LION bioscience AG, Heidelberg, Germany. ralf.tolle@lionbioscience.com. Medline UID: 22078889 21. Wu, R.; Ma, C. X.; Painter, I.Zeng, Z. B. Simultaneous maximum likelihood estimation of linkage and linkage phases in outcrossing species. Theor Popul Biol. 61:349-63, 2002. ADDRESS: Department of Statistics, University of Florida, Gainesville, Florida 32611, USA. rwu@stat.ufl.edu. Medline UID: 22025769 22. Yi, N. and Xu, S. Mapping quantitative trait loci with epistatic effects. Genet Res. 79:185-98, 2002. ADDRESS: Department of Botany and Plant Sciences, University of California, Riverside, CA 92521-0124, USA. Medline UID: 22069406 ********************************************************************** Margaret and Lyman Crittenden e-mail: crittend@itis.com 8550 Highway 19 Phone: 608-798-0791 Cross Plains, WI 53528 *********************************************************************** ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ -o U.S. PIG GENOME COORDINATION PROJECT - sponsored by USDA/CSREES -o WEB: http://www.genome.iastate.edu/