From crittend@itis.com Mon Sep 23 21:57:52 2002 Date: Fri, 20 Sep 2002 16:26:02 -0700 From: Lyman/Margaret Crittenden To: Multiple Recipients of Subject: September, 2002 Mapping References Resent-Date: 20 Sep 2002 21:30:59 -0000 Resent-From: angenmap@genome.ansci.iastate.edu Resent-cc: recipient list not shown: ; [ AnGenMap Discussion Mailing List - Mail distributed to 878 members ] [ INFO: http://www.genome.iastate.edu/community/discuss.html ] ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ JOURNAL REFS. (MAPPING METHODS AND REVIEWS) NLM 9/02 1. Bolard, M. and Boichard, D. Use of maternal information for QTL detection in a (grand)daughter design. Genet Sel Evol. 34:335-52, 2002. ADDRESS: Station de genetique quantitative et appliquee, Institut national de la recherche agronomique, 78352 Jouy-en-Josas cedex, France. Medline UID: 22077221 2. Bronner, G.; Spataro, B.; Page, M.; Gautier, C.Rechenmann, F. Modeling comparative mapping using objects and associations. Comput Chem. 26:413-20, 2002. ADDRESS: Laboratoire de Biometrie et Biologie Evolutive, UMR CNRS 5558 Lyon I Bat Gregoire Mendel, Villeurbanne, France. bronner@biomserv.univ-lyon1.fr. Medline UID: 22138869 3. Chakraborty, R.; Moreau, L.Dekkers, J. C. A method to optimize selection on multiple identified quantitative trait loci. Genet Sel Evol. 34:145-70, 2002. ADDRESS: Department of Animal Science, 225C Kildee Hall, Iowa State University Ames, IA 50011, USA. jdekkers@iastate.edu. Medline UID: 22077211 4. Dekkers, J. C.; Chakraborty, R.Moreau, L. Optimal selection on two quantitative trait loci with linkage. Genet Sel Evol. 34:171-92, 2002. ADDRESS: Department of Animal Science, 225 Kildee Hall, Iowa State University Ames, IA 50011, USA. jdekkers@iastate.edu. Medline UID: 22077212 5. Feingold, E. Regression-based quantitative-trait-locus mapping in the 21st century. Am J Hum Genet. 71:217-22, 2002. Medline UID: 22149429 6. Heaton, M. P.; Harhay, G. P.; Bennett, G. L.; Stone, R. T.; Grosse, W. M.; Casas, E.; Keele, J. W.; Smith, T. P.; Chitko-McKown, C. G.Laegreid, W. W. Selection and use of SNP markers for animal identification and paternity analysis in U.S. beef cattle. Mamm Genome. 13:272-81, 2002. ADDRESS: USDA, ARS, U.S. Meat Animal Research Center (MARC), State Spur 18D, P.O. Box 166, Clay Center, Nebraska 68933-0166, USA. heaton@email.marc.usda.gov. Medline UID: 22012001 7. Korstanje, R. and Paigen, B. >From QTL to gene: the harvest begins. Nat Genet. 31:235-6, 2002. ADDRESS: The Jackson Laboratory, 600 Main Street, Bar Harbor, Maine 04609, USA. Medline UID: 22084379 8. Le Hellard, S.; Ballereau, S. J.; Visscher, P. M.; Torrance, H. S.; Pinson, J.; Morris, S. W.; Thomson, M. L.; Semple, C. A.; Muir, W. J.; Blackwood, D. H.; Porteous, D. J.Evans, K. L. SNP genotyping on pooled DNAs: comparison of genotyping technologies and a semi automated method for data storage and analysis. Nucleic Acids Res. 30:e74, 2002. ADDRESS: Medical Genetics Section, Molecular Medicine Centre, University of Edinburgh, Western General Hospital, Crewe Road, Edinburgh EH4 2XU, UK. s.lehellard@ed.ac.uk. Medline UID: 22136166 9. Nagaraju, J.; Kathirvel, M.; Subbaiah, E. V.; Muthulakshmi, M.Kumar, L. D. FISSR-PCR: a simple and sensitive assay for highthroughput genotyping and genetic mapping. Mol Cell Probes. 16:67-72, 2002. ADDRESS: Laboratory of Molecular Genetics, Centre for DNA Fingerprinting and Diagnostics, Nacharam, Hyderabad, India. jnagaraju@www.cdfd.org.in. Medline UID: 22000234 10. O'Meara, D.; Ahmadian, A.; Odeberg, J.Lundeberg, J. SNP typing by apyrase-mediated allele-specific primer extension on DNA microarrays. Nucleic Acids Res. 30:e75, 2002. ADDRESS: Department of Biotechnology, Royal Institute of Technology (KTH), AlbaNova University Center, S-106 91 Stockholm, Sweden. Medline UID: 22136167 11. Rebeiz, M.; Reeves, N. L.Posakony, J. W. SCORE: a computational approach to the identification of cis-regulatory modules and target genes in whole-genome sequence data. Site clustering over random expectation. Proc Natl Acad Sci U S A. 99:9888-93, 2002. ADDRESS: Division of Biological Sciences, Cell and Developmental Biology, University of California at San Diego, La Jolla, CA 92093-0349, USA. Medline UID: 22133741 12. Rosa, G. J.; Yandell, B. S.Gianola, D. A Bayesian approach for constructing genetic maps when markers are miscoded. Genet Sel Evol. 34:353-69, 2002. ADDRESS: Department of Biostatistics, UNESP, Botucatu, SP, Brazil. rosag@msu.edu. Medline UID: 22077222 13. Schulze, T. G.; Chen, Y. S.; Akula, N.; Hennessy, K.; Badner, J. A.; McInnis, M. G.; DePaulo, J. R.; Schumacher, J.; Cichon, S.; Propping, P.; Maier, W.; Rietschel, M.; Nothen, M. M.McMahon, F. J. Can long-range microsatellite data be used to predict short-range linkage disequilibrium? Hum Mol Genet. 11:1363-72, 2002. ADDRESS: Department of Psychiatry, The University of Chicago, Chicago, IL 60637, USA. schulze@uchicago.edu. Medline UID: 22021343 14. Sham, P. C.; Purcell, S.; Cherny, S. S.Abecasis, G. R. Powerful regression-based quantitative-trait linkage analysis of general pedigrees. Am J Hum Genet. 71:238-53, 2002. ADDRESS: SGDP Research Centre, Institute of Psychiatry, King's College, Denmark Hill, London SE5 8AF, United Kingdom. p.sham@iop.kcl.ac.uk. Medline UID: 22104868 15. Vignal, A.; Milan, D.; SanCristobal, M.Eggen, A. A review on SNP and other types of molecular markers and their use in animal genetics. Genet Sel Evol. 34:275-305, 2002. ADDRESS: Laboratoire de genetique cellulaire, Inra, chemin de Borde-Rouge, Auzeville BP 27, 31326 Castanet-Tolosan cedex, France. vignal@toulouse.inra.fr. Medline UID: 22077219 ********************************************************************** Margaret and Lyman Crittenden e-mail: crittend@itis.com 8550 Highway 19 Phone: 608-798-0791 Cross Plains, WI 53528 *********************************************************************** ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ -o U.S. PIG GENOME COORDINATION PROJECT - sponsored by USDA/CSREES -o WEB: http://www.genome.iastate.edu/