From crittend@itis.com Wed Nov 13 11:40:13 2002 Date: Tue, 12 Nov 2002 19:22:44 -0800 From: Lyman/Margaret Crittenden To: Multiple Recipients of Subject: Mapping References for October and November, 2002 Resent-Date: 13 Nov 2002 01:43:44 -0000 Resent-From: angenmap@genome.ansci.iastate.edu Resent-cc: recipient list not shown: ; [ AnGenMap Discussion Mailing List - Mail distributed to 890 members ] [ INFO: http://www.genome.iastate.edu/community/discuss.html ] ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ Note that these are references for both October and November, 2002. JOURNAL REFS. (MAPPING METHODS AND REVIEWS) NLM 10/02 & 11/02 1. Abstracts of the 15th European Colloquium on Animal Cytogenetics and Gene Mapping. Sorrento, Italy, 2-4 June 2002. Chromosome Res. 10 Suppl 1:1-54, 2002. Medline UID: 22261657 2. Chen, L. Y.; Lu, S. H.; Shih, E. S.Hwang, M. J. Single nucleotide polymorphism mapping using genome-wide unique sequences. Genome Res. 12:1106-11, 2002. ADDRESS: Institute of Biomedical Sciences, Academia Sinica, Taipei 11529, Taiwan. Medline UID: 22092149 3. Du, F. X.; DeNise, S. K.Woodward, B. W. Heterozygosity for genes influencing a quantitative trait. J Anim Sci. 80:1478-88, 2002. ADDRESS: Animal Genomics, Monsanto Company, Chesterfield, MO 63198, USA. Medline UID: 22073021 4. Jongjoo, K.; Davis, S. K.Taylor, J. F. Application of non-parametric bootstrap methods to estimate confidence intervals for QTL location in a beef cattle QTL experimental population. Genet Res. 79:259-63, 2002. ADDRESS: Animal Science Department, Texas A&M University, College Station 78743, USA. JJKim@ulg.ac.be. Medline UID: 22208441 5. Jurinke, C.; van den Boom, D.; Cantor, C. R.Koster, H. The use of MassARRAY technology for high throughput genotyping. Adv Biochem Eng Biotechnol. 77:57-74, 2002. ADDRESS: SEQUENOM, Inc, San Diego, CA 92121, USA. cjurinke@sequenom.com. Medline UID: 22214846 6. Lange, C. and Laird, N. M. Power calculations for a general class of family-based association tests: dichotomous traits. Am J Hum Genet. 71:575-84, 2002. ADDRESS: Department of Biostatistics, Harvard School of Public Health, Boston, MA, 02115, USA. clange@hsph.harvard.edu. Medline UID: 22168702 7. Lee, W. C. Testing for candidate gene linkage disequilibrium using a dense array of single nucleotide polymorphisms in case-parents studies. Epidemiology. 13:545-51, 2002. ADDRESS: Graduate Institute of Epidemiology, College of Public Health, National Taiwan University, Taipei, Taiwan. wenchung@ha.mc.ntu.edu.tw. Medline UID: 22178711 8. Love, B.; Rank, D. R.; Penn, S. G.; Jenkins, D. A.Thomas, R. S. A conditional density error model for the statistical analysis of microarray data. Bioinformatics. 18:1064-72, 2002. ADDRESS: Aeomica, 928 East Arques Avenue, Sunnyvale, CA 94085, USA. drblove@yahoo.com. Medline UID: 22165548 9. Matsuda, H. and Iwaisaki, H. Prediction of additive genetic effects for the QTL-cluster on the basis of data on surrounding markers in outbred populations. J Appl Genet. 43:193-207, 2002. ADDRESS: Course of Environmental Management Science, Graduate School of Science and Technology, Niigata University, Japan. Medline UID: 22075086 10. Nairz, K.; Stocker, H.; Schindelholz, B.Hafen, E. High-resolution SNP mapping by denaturing HPLC. Proc Natl Acad Sci U S A. 99:10575-80, 2002. ADDRESS: Zoologisches Institut der Universitat Zurich, Winterthurerstrasse 190, CH-8057 Zurich, Switzerland. Medline UID: 22155937 11. Olshen, A. B. and Jain, A. N. Deriving quantitative conclusions from microarray expression data. Bioinformatics. 18:961-70, 2002. ADDRESS: Comprehensive Cancer Center, Cancer Research Institute, and Department of Laboratory Medicine, University of California, San Francisco, CA 94143-0128, USA. Medline UID: 22112549 12. Pareek, C. S.; Pareek, R. S.Walawski, K. Novel linkage mapping approach using DNA pooling in human and animal genetics. I. Detection of complex disease loci. J Appl Genet. 43:175-92, 2002. ADDRESS: Department of Animal Genetics, University of Warmia and Mazury in Olsztyn, Poland. pareek@moskit.uwm.edu.pl. Medline UID: 22075085 13. Novel linkage mapping approach using DNA pooling in human and animal genetics. II. Detection of quantitative traits loci in dairy cattle. J Appl Genet. 43:309-18, 2002. ADDRESS: Department of Animal Genetics, University of Warmia and Mazury in Olsztyn, Poland. pareek@moskit.uwm.edu.pl. Medline UID: 22166471 14. Perez-Enciso, M. and Roussot, O. A method for computing identity by descent probabilities and quantitative trait loci mapping with dominant (AFLP) markers. Genet Res. 79:247-58, 2002. ADDRESS: Station d'Amelioration Genetique des Animaux, INRA, Castanet-Tolosan, France. mperez@toulouse.inra.fr. Medline UID: 22208440 15. Peterson, L. E. and Lau, K. Observation of intermittency in gene expression on cDNA microarrays. Genome Biol. 3:PREPRINT0005, 2002. ADDRESS: Departments of Medicine, Molecular and Human Genetics, Baylor College of Medicine, Houston, Texas 77030, USA. peterson@bcm.tmc.edu. Medline UID: 22172616 16. Surma, M.; Kaczmarek, Z.Adamski, T. A simple test for detection of linkage. J Appl Genet. 43:171-4, 2002. ADDRESS: Institute of Plant Genetics Polish Academy of Sciences, Poznan, Poland. msur@igr.poznan.pl. Medline UID: 22075084 17. Tefferi, A.; Bolander, M. E.; Ansell, S. M.; Wieben, E. D.Spelsberg, T. C. Primer on medical genomics. Part III: Microarray experiments and data analysis. Mayo Clin Proc. 77:927-40, 2002. ADDRESS: Division of Hematology and Internal Medicine, Mayo Clinic, Rochester, Minn 55905, USA. Medline UID: 22218945 18. Ukai, H.; Ukai-Tadenuma, M.; Ogiu, T.Tsuji, H. A new technique to prevent self-ligation of DNA. J Biotechnol. 97:233-42, 2002. ADDRESS: Japan Science and Technology Corporation, National Institute of Radiological Sciences, 4-9-1 Anagawa, Inage-ku, Chiba, 263-8555, Japan. Medline UID: 22079788 19. Wolfe, J. L.; Kawate, T.; Sarracino, D. A.; Zillmann, M.; Olson, J.; Stanton, V. P. JrVerdine, G. L. A genotyping strategy based on incorporation and cleavage of chemically modified nucleotides. Proc Natl Acad Sci U S A. 99:11073-8, 2002. ADDRESS: Variagenics, Incorporated, 60 Hampshire Street, Cambridge, MA 02139, USA. jwolfe@variagenics.com. Medline UID: 22177168 ********************************************************************** Margaret and Lyman Crittenden e-mail: crittend@itis.com 8550 Highway 19 Phone: 608-798-0791 Cross Plains, WI 53528 *********************************************************************** ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ -o U.S. PIG GENOME COORDINATION PROJECT - sponsored by USDA/CSREES -o WEB: http://www.genome.iastate.edu/