From crittend@itis.com Mon Dec 23 09:41:30 2002 Date: Fri, 20 Dec 2002 16:09:27 -0800 From: Lyman/Margaret Crittenden To: Multiple Recipients of Subject: December, 2002 Mapping References Resent-Date: 20 Dec 2002 22:11:09 -0000 Resent-From: angenmap@genome.ansci.iastate.edu Resent-cc: recipient list not shown: ; [ AnGenMap Discussion Mailing List - Mail distributed to 901 members ] [ INFO: http://www.genome.iastate.edu/community/discuss.html ] ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ JOURNAL REFS. (MAPPING METHODS AND REVIEWS) NLM 12/02 1. Aerts, J.; Wetzels, Y.; Cohen, N.Aerssens, J. Data mining of public SNP databases for the selection of intragenic SNPs. Hum Mutat. 20:162-73, 2002. ADDRESS: Department Pharmacogenomics, Janssen Research Foundation, Beerse, Belgium. Medline UID: 22191097 2. Ayoubi, P.; Jin, X.; Leite, S.; Liu, X.; Martajaja, J.; Abduraham, A.; Wan, Q.; Yan, W.; Misawa, E.Prade, R. A. PipeOnline 2.0: automated EST processing and functional data sorting. Nucleic Acids Res. 30:4761-9, 2002. ADDRESS: Department of Microbiology and Molecular Genetics and. School of Mechanical and Aerospace Engineering, Oklahoma State University, Stillwater, OK 74078, USA. Medline UID: 22297846 3. Crowe, M. L.; Rana, D.; Fraser, F.; Bancroft, I.Trick, M. BACFinder: genomic localisation of large insert genomic clones based on restriction fingerprinting. Nucleic Acids Res. 30:e118, 2002. ADDRESS: John Innes Centre, Norwich Research Park, Colney, Norwich NR4 7UH, UK. Medline UID: 22297856 4. Darvasi, A. and Pisante-Shalom, A. Complexities in the genetic dissection of quantitative trait loci. Trends Genet. 18:489-91, 2002. ADDRESS: The Life Sciences Institute, The Hebrew University of Jerusalem, Jerusalem 91904, Israel. arield@cc.huji.ac.il. Medline UID: 22240406 5. Gavin, A. J.; Scheetz, T. E.; Roberts, C. A.; O'Leary, B.; Braun, T. A.; Sheffield, V. C.; Soares, M. B.; Robinson, J. P.Casavant, T. L. Pooled library tissue tags for EST-based gene discovery. Bioinformatics. 18:1162-6, 2002. ADDRESS: Department of Electrical and Computer Engineering, The University of Iowa, Iowa City, IA 52242, USA. Medline UID: 22205937 6. Hwang, D.; Schmitt, W. A.; Stephanopoulos, G.Stephanopoulos, G. Determination of minimum sample size and discriminatory expression patterns in microarray data. Bioinformatics. 18:1184-93, 2002. ADDRESS: Department of Chemical Engineering, Massachusetts Institute of Technology, Cambridge, MA 02139, USA. Medline UID: 22205940 7. Keles, S.; van der Laan, M.Eisen, M. B. Identification of regulatory elements using a feature selection method. Bioinformatics. 18:1167-75, 2002. ADDRESS: Division of Biostatistics, U. of California, Berkeley, CA 94720, USA. keles@stat.berkeley.edu. Medline UID: 22205938 8. Kell, D. B. Genotype-phenotype mapping: genes as computer programs. Trends Genet. 18:555-9, 2002. ADDRESS: Dept of Chemistry, UMIST, Manchester, UK. dbk@umist.ac.uk. Medline UID: 22303048 9. Lange, C. and Laird, N. M. On a general class of conditional tests for family-based association studies in genetics: the asymptotic distribution, the conditional power, and optimality considerations. Genet Epidemiol. 23:165-80, 2002. ADDRESS: Department of Biostatistics, Harvard School of Public Health, Boston, Massachusetts 02115, USA. clange@hsph.harvard.edu. Medline UID: 22202120 10. Larribe, F.; Lessard, S.Schork, N. J. Gene mapping via the ancestral recombination graph. Theor Popul Biol. 62:215-29, 2002. ADDRESS: Departement de Mathematiques et de Statistique, Universite de Montreal, C.P. 6128, Succursale Centre-Ville, Montreal, Quebec, Canada, H3C 3J7. larribe@dms.umontreal.ca. Medline UID: 22158213 11. Malkin, I.; Ginsburg, E.Elston, R. C. Increase in power of transmission-disequilibrium tests for quantitative traits. Genet Epidemiol. 23:234-44, 2002. ADDRESS: Department of Anatomy and Anthropology, Sackler Faculty of Medicine, Tel Aviv University, Tel Aviv, Israel. idak@post.tau.ac.il. Medline UID: 22271592 12. Muthusamy, B. and Pandey, A. A roadmap of the mouse genome. Trends Genet. 18:553, 2002. Medline UID: 22303046 13. Park, Y. and Spouge, J. L. The correlation error and finite-size correction in an ungapped sequence alignment. Bioinformatics. 18:1236-42, 2002. ADDRESS: National Center for Biotechnology Information, National Library of Medicine, Bethesda, MD 20894, USA. Medline UID: 22205933 14. Reinke, V. and White, K. P. Developmental genomic approaches in model organisms. Annu Rev Genomics Hum Genet. 3:153-78, 2002. ADDRESS: Department of Genetics, Yale University School of Medicine, New Haven, Connecticut 06520, USA. valerie.reinke@yale.edu. Medline UID: 22182435 15. Zhang, M. Q. Extracting functional information from microarrays: a challenge for functional genomics. Proc Natl Acad Sci U S A. 99:12509-11, 2002. ADDRESS: Cold Spring Harbor Laboratory, 1 Bungtown Road, Cold Spring Harbor, NY 11724, USA. mzhang@cshl.edu. Medline UID: 22247765 16. Zhu, X.; Zhang, S.; Zhao, H.Cooper, R. S. Association mapping, using a mixture model for complex traits. Genet Epidemiol. 23:181-96, 2002. ADDRESS: Department of Preventive Medicine and Epidemiology, Loyola University Medical Center, Maywood, Illinois 60153, USA. xzhul@lumc.edu. Medline UID: 22202121 ********************************************************************** Margaret and Lyman Crittenden e-mail: crittend@itis.com 8550 Highway 19 Phone: 608-798-0791 Cross Plains, WI 53528 *********************************************************************** ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ -o U.S. PIG GENOME COORDINATION PROJECT - sponsored by USDA/CSREES -o WEB: http://www.genome.iastate.edu/