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gnStringTools.cpp File Reference

#include "gn/gnStringTools.h"

Go to the source code of this file.

Functions
void	BaseCount (const string &bases, gnSeqI &a_count, gnSeqI &c_count, gnSeqI &g_count, gnSeqI &t_count, gnSeqI &other_count)
unsigned int	removeSpace (string &str)
void	removeEndSpace (string &str)
bool	isNewLine (char ch)
bool	isWhiteSpace (char ch)
bool	isSpace (char ch)
string	uintToString (unsigned int value)
string	ulongToString (unsigned long value)
unsigned int	parseValue (string &valueString)
int	parseUintValue (string &valueString)
int	parseIntValue (string &valueString)
vector< string >	tokenizeString (const string &str, char delimiter)
vector< string >	tokenizeString (const char *str, unsigned int len, char delimiter)
void	standarizePathString (string &oFileName)
string	getPathString (string oFileName)
string	getFileString (string oFileName)
string	getExtString (string oFileName)
string	getFileNoExtString (string oFileName)

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Function Documentation

void BaseCount (  const string &    bases, gnSeqI &    a_count, gnSeqI &    c_count, gnSeqI &    g_count, gnSeqI &    t_count, gnSeqI &    other_count )

Definition at line 14 of file gnStringTools.cpp. References uint32. Referenced by gnGBKSource::Write().

string getExtString (  string    oFileName )

Definition at line 263 of file gnStringTools.cpp.

string getFileNoExtString (  string    oFileName )

Definition at line 273 of file gnStringTools.cpp.

string getFileString (  string    oFileName )

Definition at line 256 of file gnStringTools.cpp. Referenced by gnSourceFactory::AddSource(), and gnSourceFactory::HasSource().

string getPathString (  string    oFileName )

Definition at line 247 of file gnStringTools.cpp. Referenced by gnDNXSource::ParseStream().

bool isNewLine (  char    ch )

Definition at line 90 of file gnStringTools.cpp. Referenced by isSpace(), and gnFASSource::ParseStream().

bool isSpace (  char    ch )

Definition at line 108 of file gnStringTools.cpp. References isNewLine(), and isWhiteSpace(). Referenced by gnFASSource::ParseStream(), and removeEndSpace().

bool isWhiteSpace (  char    ch )

Definition at line 99 of file gnStringTools.cpp. Referenced by isSpace().

int parseIntValue (  string &    valueString )

Definition at line 177 of file gnStringTools.cpp.

int parseUintValue (  string &    valueString )

Definition at line 161 of file gnStringTools.cpp.

unsigned int parseValue (  string &    valueString )

Definition at line 150 of file gnStringTools.cpp.

void removeEndSpace (  string &    str )

Definition at line 73 of file gnStringTools.cpp. References isSpace().

unsigned int removeSpace (  string &    str )

Definition at line 35 of file gnStringTools.cpp.

void standarizePathString (  string &    oFileName )

Definition at line 238 of file gnStringTools.cpp. Referenced by gnSourceFactory::HasPath(), gnSourceFactory::HasSource(), and gnSourceFactory::PathExists().

vector< string > tokenizeString (  const char *    str, unsigned int    len, char    delimiter )

Definition at line 214 of file gnStringTools.cpp. Referenced by tokenizeString().

vector< string > tokenizeString (  const string &    str, char    delimiter )

Definition at line 209 of file gnStringTools.cpp.

string uintToString (  unsigned int    value )

Definition at line 117 of file gnStringTools.cpp. Referenced by gnFASSource::Write(), and gnGBKSource::Write().

string ulongToString (  unsigned long    value )

Definition at line 133 of file gnStringTools.cpp.

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